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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12457388 chr18:55205081 A/G VPS4B chr18:61056423-61089716:- -0.66 -6.29 8.86E-10 Box Plot
BLCA rs12457388 chr18:55205081 A/G ZCCHC2 chr18:60190240-60254942:+ -0.69 -6.02 4.0E-9 Box Plot
BLCA rs12466469 chr2:101061794 A/G LOC285359 chr3:101431278-101432259:+ 0.4 7.5 4.64E-13 Box Plot
BLCA rs12469332 chr2:101166523 G/A LOC285359 chr3:101431278-101432259:+ 0.47 9.24 1.77E-18 Box Plot
BLCA rs12474526 chr2:101149619 C/T LOC285359 chr3:101431278-101432259:+ -0.41 -7.68 1.35E-13 Box Plot
BLCA rs12475927 chr2:193294039 C/G CT47A9 chrX:120077415-120080737:- -0.26 -6.96 1.53E-11 Box Plot
BLCA rs12482853 chr21:47238537 T/A HMX1 chr4:8847802-8873543:- 0.41 6.48 2.89E-10 Box Plot
BLCA rs12484808 chr22:23635987 A/C LOC644165 chr22:25028882-25049326:+ -0.58 -9.39 5.46E-19 Box Plot
BLCA rs12484808 chr22:23635987 A/C POM121L10P chr22:25053448-25054732:- -0.42 -6.51 2.33E-10 Box Plot
BLCA rs12487173 chr3:99494722 T/C TTTY2 chrY:9578193-9596085:+ 0.6 6.16 1.83E-9 Box Plot
BLCA rs12509057 chr4:38386658 C/G MRS2P2 chr12:72243008-72244208:- -0.37 -6.25 1.1E-9 Box Plot
BLCA rs12509057 chr4:38386658 C/G POU2F1 chr1:167190066-167396582:+ -0.37 -6.06 3.26E-9 Box Plot
BLCA rs12509381 chr4:188605828 C/T C4orf41 chr4:184580446-184634744:+ -0.7 -6.55 1.83E-10 Box Plot
BLCA rs12517408 chr5:105413098 C/T ZMYND17 chr10:75180397-75193319:- -0.31 -6.79 4.19E-11 Box Plot
BLCA rs12517727 chr5:67016768 C/T NSMCE1 chr16:27236312-27280115:- 0.45 6.04 3.56E-9 Box Plot